Prediction of signal peptides in archaea
نویسندگان
چکیده
منابع مشابه
Prediction of signal peptides in archaea.
Computational prediction of signal peptides (SPs) and their cleavage sites is of great importance in computational biology; however, currently there is no available method capable of predicting reliably the SPs of archaea, due to the limited amount of experimentally verified proteins with SPs. We performed an extensive literature search in order to identify archaeal proteins having experimental...
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We present here a neural network-based method for detection of signal peptides (abbreviation used: SP) in proteins. The method is trained on sequences of known signal peptides extracted from the Swiss-Prot protein database and is able to work separately on prokaryotic and eukaryotic proteins. A query protein is dissected into overlapping short sequence fragments, and then each fragment is analy...
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ژورنال
عنوان ژورنال: Protein Engineering Design and Selection
سال: 2008
ISSN: 1741-0126,1741-0134
DOI: 10.1093/protein/gzn064